Common interchange standards for proteomics data: Public availability of tools and schema. Report on the Proteomic Standards Initiative Workshop, 2nd Annual HUPO Congress, Montreal, Canada, 8–11th October 2003
Identifieur interne : 000265 ( France/Analysis ); précédent : 000264; suivant : 000266Common interchange standards for proteomics data: Public availability of tools and schema. Report on the Proteomic Standards Initiative Workshop, 2nd Annual HUPO Congress, Montreal, Canada, 8–11th October 2003
Auteurs : Sandra Orchard [Royaume-Uni] ; Henning Hermjakob [Royaume-Uni] ; Randall K. Julian Jr. [États-Unis] ; Kai Runte [Royaume-Uni] ; David Sherman [France] ; Jérôme Wojcik [France] ; Weimin Zhu [Royaume-Uni] ; Rolf Apweiler [Royaume-Uni]Source :
- PROTEOMICS [ 1615-9853 ] ; 2004-02.
English descriptors
Abstract
The Proteomics Standards Initiative (PSI) aims to define community standards for data representation in proteomics and to facilitate data comparision, exchange and verification. To this end, a Level 1 Molecular Interaction XML data exchange format has been developed which has been accepted for publication and is freely available at the PSI website (http.//psidev.sf.net/). Several major protein interaction databases are already making data available in this format. A draft XML interchange format for mass spectrometry data has been written and is currently undergoing evaluation whilst work is ongoing to develop a proteomics data integration model, MIAPE.
Url:
DOI: 10.1002/pmic.200300694
Affiliations:
- France, Royaume-Uni, États-Unis
- Aquitaine, Indiana, Nouvelle-Aquitaine, Île-de-France
- Bordeaux, Paris
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- to stream Istex, to step Checkpoint: 000D98
- to stream Main, to step Merge: 003042
- to stream Main, to step Curation: 002C81
- to stream Main, to step Exploration: 002C81
- to stream France, to step Extraction: 000265
Links to Exploration step
ISTEX:5CD09448CCBDAFFC3CCA3CCBB26FB7848E0037D2Le document en format XML
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